I think you will be fine with a thumb operated rear brake. The ABS part isn't part of the master cylinder so you will just need a new hydraulic line made up to connect to the ABS modulator where the foot brake line would have connected. You'll have to be carefull to bleed out any air that gets into the modulator.
My last 5 bikes have all had ABS & I wouldn't now buy a bike without this feature. Modern bikes have such powerfull front brakes that it is very easy, especially in a panic situation & wet road, to lock the front wheel & go down. I havn't had to make use of it yet, but it's reassuring to know you can brake to the max without fear of locking the wheels. ABS wont help you if you have to brake while leaned over around a bend though.
Hope you get it sorted ok.
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