In case it helps anyone in the future I can now update on the resolution to the two problems in my original post. The car is a Mk ll Focus Ghia with the 1.6L Ti-VCT 115PS engine.
Check Engine Light: The CEL didn't go out on it's own so after about 1 week I returned the car to the garage for further investigation. They cleaned the spark plugs, checked the exhaust emissions and found them to be OK to MOT requirements, then reset the CEL to off. However at the next engine start the light came back on. (I later found out that it takes two engine start cycles for this fault to be registered by the engine management computer.) I decided to investigate myself and found that the wiring of the Heated Oxygen Sensor No. 2 (the after-CAT sensor) on Bank 1 (for cylinders 1 and 2) of the catalytic converter had made contact with the CAT, burning throught the insulation resulting in an intermittent short circuit between one of the sensor heater wires and chassis. Fuse F33 (10A) in the engine fuse box was blown. I found that on this car F33 supplies +12V to the heaters on all four oxygen sensors and not just two of the four as stated in the Owner's Guide supplied with the car. Also, the fault codes generated by this fuse blowing relate only to the two pre-CAT sensors.
The reason for the sensor wiring touching the CAT was a combination of the wiring support bracket broken due to corrosion, the CAT heat shield falling down due to corrosion at the fixings, and general movement of the wiring during the investigation of the misfiring fault.
I have made a temporary fix by cutting the 4 wires to the sensor in order to thread insulating sleeving over the burned wires, rejoining the wires, then tying up away from the CAT. I replaced the 10A fuse and reset the CEL using a U480 OBD ll Diagnostic Scanner tool, bought from an ebay seller for about £18. The light remains out after about a weeks running.
Alarm Fault: This problem fixed itself after a few days. I don't know why I'm but pleased to accept that I can open and close the doors again using the remote key fob.
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